Why does the rs2522833 Geneview display show that an allele change of TCT to GCT when the allele section at the top of the cluster report shows A/C?
Please note that the GeneView display shows the allele change in the mRNA field. rs2522833 maps to the reference genomic assembly on the forward strand with alleles (A/C), but the mRNA is on the reverse strand of the assembly, so the SNP allele is flipped (reverse complement) to (T/G) for reporting on the mRNA.
Related Questions
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