Where is the resource that allows you to actually see in a graphic how many SNPs are known to lie within a particular gene, and their physical coordinates?
The resource you refer to is the sequence viewer graphical display of a gene region on the human genome. We had to discontinue this resource because the NCBI sequence viewer itself fails when the sequence under consideration is very large (contig sized). You can still get a sequence view of the mRNA record using the seqview button on the Entrez SNP display, but this won’t show intronic SNPs. There may be other inconsistencies even among coding SNPs since the position of SNPs on mRNAs is taken from a different mapping pipeline then the one used to compute genomic locations. For now, you can search Entrez SNP using the gene symbol or gene id and click the ‘GeneView’ icon on any of the displayed rs records:1.Go to Entrez SNP and enter the search terms “LPL AND Human” (without the quotation marks) into the text box at the top of the page, and click on The “Go” button.2.You will get a page back that contains 158 results to your query. You can also use Entrez SNP to get a rough text represen
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