Where do I upload my single combined file containing data from all hybs (final gene expression matrix)?
Upload all you raw data for the hybridizations first. If MIAMExpress complains that you have not uploaded normalized data at this stage it is because you have a normalization protocol selected so unselect this protocol. After selecting all the raw data files click the submit button on the hybridizations tab in the batch upload tool (or, in the web forms, return to the ‘create hybridizations’ page and click the continue button at the end of the page). You will then be taken to a form where you can upload your final gene expression matrix and select the transformation protocol describing how it was generated.
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