Important Notice: Our web hosting provider recently started charging us for additional visits, which was unexpected. In response, we're seeking donations. Depending on the situation, we may explore different monetization options for our Community and Expert Contributors. It's crucial to provide more returns for their expertise and offer more Expert Validated Answers or AI Validated Answers. Learn more about our hosting issue here.

What tools are available to query the I.M.A.G.E. dataset?

April 26, 2017dataset i.m.a.g.e query tools

0

Posted

What tools are available to query the I.M.A.G.E. dataset?

1 Answer

0

Posted

In response to requests for help querying the large I.M.A.G.E. dataset, informatics staff have developed as set of web-based tools. These include the IQ, a general-purpose clone and library query tool. Additional tools have been developed by our collaborators. The Mammalian Gene Collection websites (MGC for human, mouse, rat and cow; XGC for Xenopus and ZGC for zebrafish) allow you to search for full-length MGC clones by gene symbol or keyword, do a nucleotide BLAST against full-length clones, download the full-length clone and sequence list, and view all ESTs and candidate full-length genes.