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What is the difference between TSA records from dbEST assemblies and TSA records from SRA/trace archive assemblies?

April 26, 2017archive Assemblies dbEST records SRA trace tsa

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What is the difference between TSA records from dbEST assemblies and TSA records from SRA/trace archive assemblies?

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Both flatfiles will display TSA as the division code, ‘TSA:’ in the beginning of the DEFINITION line, and the same KEYWORDS. In addition, each type must be registered as a project. However, for dbEST derived TSA records there will be an assembly block displayed on the flatfile which lists the ESTs that were used to create the assembly. See EZ000001 for an example. TSA records derived from SRA/trace archive sequences will not have a assembly block but instead a DBLINK number that will link to the assembly archive sequence data that is the basis for the assembly. See EZ007475 for an example.