Important Notice: Our web hosting provider recently started charging us for additional visits, which was unexpected. In response, we're seeking donations. Depending on the situation, we may explore different monetization options for our Community and Expert Contributors. It's crucial to provide more returns for their expertise and offer more Expert Validated Answers or AI Validated Answers. Learn more about our hosting issue here.

What happens to the reads that can be mapped to many positions?

happens mapped positions READS
0
Posted

What happens to the reads that can be mapped to many positions?

0

If a read can be mapped to several equally best positions, Maq will randomly choose one position and give the alignment a zero mapping quality.

Related Questions

What is your question?

*Sadly, we had to bring back ads too. Hopefully more targeted.

Experts123