What does the tree struture on the left hand side of a pathway/accession details page represent?
The tree structure represents the hierarchical organistaion of the model. Top most is the Accession name which is the model name, if the model is a pathway model then below the Accession name the pathway name is listed. The Pathway name has the participating molecule, enzyme and recation listed which when clicked lead to the specific details. If the accession is a network model then there will be more than one interacting pathway names listed. • Why do some Shared_Object_pathways do not have any molecule, enzyme and reactions? It is because some of the pathway do not use any of the shared objects molecule or enzyme or reaction. • What are the biological pathways represented on DOQCS? The majority of biological pathways represented on DOQCS are neuronal signaling pathways. There are signaling pathways from other systems like MAPK pathway in Xenopus oocytes, E.coli chemotaxis pathway, Firefly luciferase pathway, cardiac pathways among others. • What is an entry date? An entry date is the
