What data results will Genpathway provide?
For ChIP Query, you will receive an excel file containing QPCR results averaged from triplicate reactions for the genomic regions/genes of interest and negative control regions. Each file includes the raw data, normalized/calculated results, and a graph. For ChIP-on-ChIP and ChIP Sequencing, the following files are provided (smaller files by email and the remainder on a CD/DVD): • Excel data files. a. Intervals. Information on all peaks, including their genomic locations, metrics for quantitation, and relationships to genes and other genomic annotations. b. Genes. Information on all genes associated with the peaks. Also includes some of the Interval information plus additional information about the genes. c. Active Regions. Information on all genomic regions that contain peaks, including their locations, Interval metrics, relationships to genes, and comparisons across samples. • Excel summary file. Correlations across samples in the numbers of Intervals and Active Regions, other assay
