What are DNA Probes?
Little more than a decade ago, toxic phytoplankton monitoring with DNA probes was still in the realm of science fiction. Today it is a reality. Probes for some key micro-algae are already in commercial use and ultimately DNA probes could become a major HAB monitoring tool. What exactly are they? Copyright Encyclopaedia Britannica DNA probes have been in use for more than a decade in medicine and dentistry, but they have only recently been developed with the aquaculture industry in mind. The DNA of a selected micro-alga is sequenced, and the sequence of nucleotides that makes up its genetic code is compared with that of other related algae using readily available computer software packages. Unique nucleotide “signatures” (usually between 15 and 50 nucleotides) are selected to develop into probes. The ribosomal RNA (rRNA) of the cell is targeted because it is abundant in cells and so good recognition, or a good “hit”, is ensured. The probes will have some “tag”, for example fluorescein,
