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If you parse a FASTA sequence format file with Bio::SeqIO the sequences won have the accession number. What to do?

April 26, 2017Accession Bio fasta file format parse sequence sequences

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If you parse a FASTA sequence format file with Bio::SeqIO the sequences won have the accession number. What to do?

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All the data is in the $seq->display_id it just needs to be parsed out. Here is some code to set the accession number.