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I can seem to obtain MODELLER to be installed to do the comparative modelling, but I have rasmol ready. Can I at least get some crude information on the prediction from PROSPECT Pro?

April 26, 2017comparative crude installed modeller modelling obtain prediction RasMol ready

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I can seem to obtain MODELLER to be installed to do the comparative modelling, but I have rasmol ready. Can I at least get some crude information on the prediction from PROSPECT Pro?

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Yes. Include -3d as an option when you do your threading. Then run rasmol on the resulting xml file. It gives you the rough fold of the backbone with some loop regions missing.