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How do I retrieve a nucleotide coding sequence when I have a protein gi number?

April 26, 2017coding GI nucleotide protein sequence

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How do I retrieve a nucleotide coding sequence when I have a protein gi number?

3 Answers

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You could go through the protein’s feature table and find the ‘coded_by’ value. The trick is to associate the coded_by nucleotide coordinates to the nucleotide entry, which you’ll retrieve using the accession number from the same feature.

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You could go through the protein’s feature table and find the ‘coded_by’ value. The trick is to associate the coded_by nucleotide coordinates to the nucleotide entry, which you’ll retrieve using the accession number from the same feature.

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10 Posted

You could go through the protein’s feature table and find the coded_by value. The trick is to associate the coded_by nucleotide coordinates to the nucleotide entry, which you’ll retrieve using the accession number from the same feature.