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How do I get my ceph data into crimap format?

April 26, 2017CEPH crimap Data format

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How do I get my ceph data into crimap format?

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[rootd;29may94] You can output the file in linkage format, and use link2gen (if you have it, see F2). The disadvantage here is that your marker names are seperated from your data, and its easy to make a mistake and get them mixed up. You can output the file in ped.out format and use mkcrigen. mkcrigen is a great program, which automatically transfers the marker-names with the data (eliminating one source of error). Unfortunately, I only have an executable with a hardcoded 80-marker maximum. Nobody can find the source code. lnktocri is very similar to link2gen, and is included in the multimap tar file John Attwood has a ceph2cri program, which reads your ped.out file and outputs a .gen file. It is available via anonymous ftp from ftp.gene.ucl.ac.uk in /pub/packages/linkage_utils. It runs on DOS machines.