How do I associate an EMBL/DDBJ/Genbank nucleotide sequence accession number with the GO ID?
In addition to the gene association files produced by the GOA project we also provide mapping files between the entries in these (arabidopsis, chicken, cow, human, mouse, rat and zebrafish) sets and other databases such as the EMBL/Genbank/DDBJ nucleotide sequence databases, HUGO, LocusLink and RefSeq at the NCBI. The readme for these files can be found at: http://www.geneontology.org/doc/goa.README Also the information to link the protein and nucleotide data exists in almost every UniProtKB entry.