How can I make repeatedly analyzing similar experiments easier?
FlowJo provides the capability to create templates of your analyses. Once you have analyzed an experiment, you can save the Workspace as a Template (under the File menu) – this saves all of your analyses, groups, table definitions and layouts, but removes the samples from the Workspace. The next time you need to analyze a similar experiment, simply add the new samples to the Template Workspace and most of the work is done for you! 3.3 In the Layout Editor, I don’t have “Placeholders” selected, yet I get a placeholder for a graphic. When I generate the batch output, I don’t see any graphs for that item. The reason that FlowJo places a Placeholder (a box with an X through it) instead of a graph in the Layout Editor is that while batch processing to compile the new layout, FlowJo could not identify a subset corresponding to the original graphic. This is likely due to a discrepancy in the annotation of the samples (i.e., “CD28Green” vs. “CD28FITC”). Note that, by default, FlowJo requires y
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- How can I make repeatedly analyzing similar experiments easier?
