How can I get my CpG site analyzed?
• If the CpG unit is not analyzable as it falls outside the analysis window, then you can run the C cleavage reaction and see if you can get that site analyzed. If the problem was too low a signal to noise ratio, then you have to increase signal to noise by increasing your PCR reaction yield or checking your dispensing/mass spectrometer performance and taking the appropriate steps to improve them.
