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How can I check which transcript variant the insert of a particular clone will match?

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How can I check which transcript variant the insert of a particular clone will match?

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To identify the transcript variants corresponding to a particular gene you may use Entrez Gene or the Ensembl Genome Browser. To find out which variant matches best to the indicated insert sequence of the clone you may perform an alignment of the sequences using the bl2seq tool from NCBI.

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