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How are The Clean Energy Project plots on the screensaver created?

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How are The Clean Energy Project plots on the screensaver created?

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The plots on the screen saver show how the energy and temperature of the molecules changes over time during a Molecular Dynamics Simulation (MDS). In this case, MDS are in some respect very similar to “real” bench-type experiments because we can use this computational technique to measure the properties of interest during a certain time interval.

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