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For proteins expressed in the cytoplasm, is the presence of biotinylated proteins in the host organism a problem?

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For proteins expressed in the cytoplasm, is the presence of biotinylated proteins in the host organism a problem?

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No. Generally, the amount of biotinylated proteins in the cytoplasm is very low and does not lead to significant inactivation of the column. In an E. coli extract derived from a 1 L culture with OD 550 = 1, the total biotin content is only around 1 nmol; column capacity is 350 nmol/ml. Even the biotinylated E. coli protein BCCP has a relatively low intracellular concentration and usually does not interfere with purification. To avoid binding BCCP to Strep•Tactin resin, add avidin to the cell lysate before chromatography (20 mg/L for an E. coli culture at OD 600=1).

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