Can the kit be used for nuclear preparations that were derived from frozen samples?
If the experimental tissue was not frozen in a cryopretective medium, it is possible that the nuclei will be fragmented. Thus, Diagenode recommends working with fresh tissues. Samples can be frozen after nuclei lysis and chromatin shearing at -80°C for several months and yield good results. Alternatively it is possible to fix the tissue and then to freeze the samples.