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Can I use NimbleGen ChIP-chip to map DNase I hypersensitive sites?

April 26, 2017chip-chip dnase hypersensitive map NimbleGen sites

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Can I use NimbleGen ChIP-chip to map DNase I hypersensitive sites?

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Yes, NimbleGen ChIP-chip arrays can be used to map DNase I hypersensitive sites. A manuscript by Crawford et al. (2006. Nature Methods. 3:503-509) describes the use of NimbleGen tiled arrays to map hypersensitive sites. Other manuscripts mapping hypersensitive sites using NimbleGen arrays include Sabo et al. (2006. Nature Methods. 3:511-518) and Follows et al. (2006. Genome Research. 16:1310-1319).