Can I use a different bisulfite treatment kit?
• Yes, you may. We have had the most success with the Zymo kit which we resell. You may have good experience with a different technique. There are two things to consider when using a different bisulfite kit: (1) Do I get PCR amplicons from the bisulfite treated DNA? If not then your kit may not be as successful as ours. (2) Will the different kit negatively affect the downstream processes? If so then this can usually be remedied by inserting a DNA cleanup set somewhere after the bisulfite treatment.
