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Can I access the MSigDB gene sets using a web service?

April 26, 2017gene msigdb service web

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Can I access the MSigDB gene sets using a web service?

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You can use one of two URLs to display the XML representation of a gene set (replace AKTPATHWAY with any gene set name): http://www.broadinstitute.org/gsea/msigdb/cards/AKTPATHWAY.xml http://www.broadinstitute.org/gsea/msigdb/geneset_page.jsp?geneSetName=AKTPATHWAY&format=xml The Downloads page provides an XML file that contains all MSigDB gene sets and the content of their gene set pages. The MSigDB page provides online access to the gene sets.